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Wind is caused by air flowing from high pressure areas to low.  The greater 
the difference in pressure and temperature between two fronts, the stronger 
the wind.  A horse's brain is more sensitive to changes in air pressure 
than are those of humans - though research into how weather affects human 
behavior seems to indicate "low barometric pressure is associated with an 
increase in impulsive behaviours".
http://www.cpa-apc.org/Publications/Archives/CJP/2003/october/schory.asp
Additionally, if you observe your horses carefully during an approaching 
storm, you will notice their degree of uneasiness increasing.  This is not 
because a storm is coming; it is because the barometric pressure is 
dropping much faster than it normally does.

As long as the air pressure is fluctuating, a horse will be disconcerted. 
If you have a horse that is not particularly bothered by wind, it was born 
with a brain that is less sensitive to pressure changes than the average horse.

Although the horse's discomfort and resulting desire to escape from the odd 
feelings in its brain is not a training issue per se, the other posts here 
suggesting that you "practice" in the wind are valid.  You cannot change 
how the horse's brain reacts to changes in pressure but you can help your 
horse realize that when it is under saddle, it is 1) safe from harm and 2) 
needs to pay attention to you despite how its brain feels.

Bottom line, you can modify your horse's behavior but this is a genetic 
limitation and cannot be fixed.


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